Blog Posts

• 23 Mar 2015 » Why Python
• 23 Mar 2015 » Bookmarklet for Oxford Off-Campus Journal Access
• 01 Mar 2015 » Short links - 2015-03-1
• 01 Mar 2015 » My Setup
• 09 May 2013 » Recording PDFs read in Skim
• 09 May 2013 » Good Lecture Notes
• 10 Jan 2013 » Compiling a comprehensive biomedical/chemical spell-check dictionary
• 20 Dec 2012 » Single day Hall Menu for Trinity today
• 11 Dec 2012 » How I keep notes
• 10 Dec 2012 » What we don't know
• 11 Sep 2010 » A complete index for XKCD
• 16 Sep 2009 » Drugs and History
• 05 Sep 2009 » Kite Diagrams
• 30 Aug 2009 » Using perl to find words in the periodic table
• 20 Aug 2009 » Arrows
• 06 Aug 2009 » Recipeconverter
• 03 Aug 2009 » Has man lost the battle against infectious disease?
• 31 Jul 2009 » Aspirin
• 30 Jul 2009 » Capsaicin
• 23 Mar 2009 » Antibiotics - their history and future

In print

• January 2018 » Melis Kayikci, A. J. Venkatakrishnan, James Scott-Brown, Charles N. J. Ravarani, Tilman Flock & M. Madan Babu. Visualization and analysis of non-covalent contacts using the Protein Contacts Atlas. Nature Structural & Molecular Biology
• December 2016 » James Scott-Brown and Antonis Papachristodoulou. sbml-diff: A tool for visually comparing {SBML} models in synthetic biology. ACS Synthetic Biology

Several other publications arising from my D.Phil work are in preparation.

Presentations

• August 2016 » Oral presentation at 8th International Workshop on Bio-Design Automation: "TEBio - Tools for Engineering Biology"

Posters

• September 2016 » Presented poster on sbml-diff at COMBINE 2016

Juvenilia

• 2011 » Harnessing the Cognitive Surplus, The Science in Society Review (Cambridge edition), Issue 12, Lent 2011
• July 2010 » How hot can a fire piston get?, article in Physics Education (Co-authored with Oscar Cunningham and Ben Goad)
• Spring 2009 » Adam and Eve and the freeing of information, article in Portsmouth Point
• October 2009 » Car Chemistry, letter to Chemistry World
• Autumn 2009 » The Honoured and the Forgotten, article in Portsmouth Point
• 5 July 2008 » Cavemen no more, letter to BMA News